sdmTMB-teaching

NOAA PSAW Workshops

March 2nd and 9th 2022

sdmTMB:

https://github.com/pbs-assess/sdmTMB

https://pbs-assess.github.io/sdmTMB/index.html

Slides:

1. Introduction to random fields

2. Introduction to sdmTMB

3. Tree spatial modelling example

4. Pacific Cod spatiotemporal example

5. Troubleshooting, tips, and tricks

6. Presence-only models

7. Time-varying coefficients

8. Spatially varying coefficients

9. Comparing models

10. Forecasting

11. Physical barriers

12. Priors and bounds

Shared Google Docs notes and questions

Week 1: https://docs.google.com/document/d/1MxjLJ4Kz5ASIT15RQWApuf5xI1k-IHFTfd__rHAyuOM/edit#

Week 2: https://docs.google.com/document/d/1j35twC1pwjCU8FEyxlAg_62ce-1icQc9XLIXJcSz-EU/edit#

Draft manuscript:

Dropbox folder

Optional exercise:

https://github.com/pbs-assess/sdmTMB-teaching/blob/main/noaa-psaw-2022/exercise-1.R

GitHub folder for these slides:

https://github.com/pbs-assess/sdmTMB-teaching

This site is open source. Improve this page.